研究成果 | 一、科研项目: 1. 国家自然科学基金委员会,地区科学基金项目,立枯丝核菌效应蛋白Rspi2抑制水稻防御反应的分子机制,32360641,2024-01至2027-12,在研,主持。 2. 海南省自然科学基金面上项目,基于单细胞转录组分析研究哈茨木霉T069与番茄根部的互作机制,823MS034,2023-03至2026-02,在研,主持。 3. 海南大学科研启动基金项目,木霉生防菌促进番茄根系生长的分子机制,KYQD(ZR)23023,2022-06至2027-06,在研,主持。 4. 国家自然科学基金委员会,国际(地区)合作与交流项目,植物三萜代谢多样性的催化机制及功能研究,31920103003,2020-01至2024-12,结题,参加。 5. 中央级公益性科研院所基本科研业务费专项,叶片单细胞图谱及其多样性的解析,IVF-BRF2019020,结题,主持。 6. 十三五国家重点研发计划子课题,高效安全靶基因筛选及RNAi作用机制,2017YFD0200904,结题,参加。 二、学术论文(†,共同第一作者;*,通讯作者): 1. Wang B, Tan S, Wu M, Feng Y, Yan W, Yun Q, Ji X, Lin R*, Zhao Z*. Effects of two Bacillus velezensis strains isolated from different sources on the growth of Capsicum annum. Frontiers in Microbiology. 2024,15:1504660. 2. Wang X, Wang Z, Yang F, Lin R*, Liu T*. Assembly, annotation, and comparative analysis of mitochondrial genomes in Trichoderma. International Journal of Molecular Sciences. 2024,25(22):12140. 3. Zhang D†, Lin R†, Yamamoto N†, Wang Z, Lin H, Okada K, Liu Y, Xiang X, Zheng T, Zheng H, Yi X, Noutoshi Y, Zheng A*. Mitochondrial-targeting effector RsIA_CtaG/Cox11 in Rhizoctonia solani AG-1 IA has two functions: plant immunity suppression and cell death induction mediated by a rice cytochrome c oxidase subunit. Molecular Plant Pathology. 2024,25(1):e13397. 4. Zhang C†, Lin R†, Hou J, Khan R, Li X, Wei H, Chen J, Wang R, Zhang J, Liu T*. The unique sugar conversion and complex CAZyme system of Trichoderma brev T069 during solid-state fermentation of cassava peel. Industrial Crops and Products. 2023, 193:116263. 5. Zhang M†, Cheng X†, Lin R†, Xie B, Nauen R, Rondon SI, Zavala JA, Palli SR, Li S, Xiong X, Zhou W*, Gao Y*. Chromosomal-level genome assembly of potato tuberworm, Phthorimaea operculella: a pest of solanaceous crops. Scientific Data. 2022,9(1):748. 6. Zhang X†, Lin R†, Ling J, Wang Y, Qin F, Lu J, Sun X, Zou M, Qi J, Xie B*, Cheng X*. Roles of species-specific legumains in pathogenicity of the pinewood nematode Bursaphelenchus xylophilus. International Journal of Molecular Sciences. 2022,23(18):10437. 7. Wu J†, Liang J†, Lin R†, Cai X, Zhang L, Guo X, Wang T, Chen H, Wang X*. Investigation of Brassica and its relative genomes in the post-genomics era. Horticulture Research. 2022,9:uhac182. 8. Tian X†, Sun T†, Lin R†, Liu R, Yang Y, Xie B*, Mao Z*. Genome sequence resource of Sarocladium terricola TR, an endophytic fungus as a potential biocontrol agent against Meloidogyne incognita. Molecular Plant-Microbe Interactions. 2022,35(6):505-508. 9. Guo X†, Liang J†, Lin R†, Zhang L, Wu J, Wang X*. Series-spatial transcriptome profiling of leafy head reveals the key transition leaves for head formation in Chinese cabbage. Frontiers in Plant Science. 2022,12:787826. 10. Lin R†, Xia Y†, Liu Y†, Zhang D†, Xiang X, Niu X, Jiang L, Wang X, Zheng A*. Comparative mitogenomic analysis and the evolution of Rhizoctonia solani anastomosis groups. Frontiers in Microbiology. 2021,12:707281. 11. Yamamoto N†, Wang Y†, Lin R†, Liang Y, Liu Y, Zhu J, Wang L, Wang S, Liu H, Deng Q, Li S, Li P, Zheng A*. Integrative transcriptome analysis discloses the molecular basis of a heterogeneous fungal phytopathogen complex, Rhizoctonia solani AG-1 subgroups. Scientific Reports. 2019,9(1):19626. 12. Lin R†, Zhang X†, Xin B, Zou M, Gao Y, Qin F, Hu Q, Xie B*, Cheng X*. Genome sequence of Isaria javanica and comparative genome analysis insights into family S53 peptidase evolution in fungal entomopathogens. Applied Microbiology and Biotechnology. 2019,103(17):7111-7128. 13. Lin R†, Qin F†, Shen B†, Shi Q, Liu C, Zhang X, Jiao Y, Lu J, Gao Y, Suarez-Fernandez M, Lopez-Moya F, Lopez-Llorca LV, Wang G, Mao Z, Ling J, Yang Y, Cheng X*, Xie B*. Genome and secretome analysis of Pochonia chlamydosporia provide new insight into egg-parasitic mechanisms. Scientific Reports. 2018,8(1):1123. 14. Lin R†, He L†, He J, Qin P, Wang Y, Deng Q, Yang X, Li S, Wang S, Wang W, Liu H, Li P*, Zheng A*. Comprehensive analysis of microRNA-Seq and target mRNAs of rice sheath blight pathogen provides new insights into pathogenic regulatory mechanisms. DNA Research. 2016,23(5):415-425. 15. Wang G†, Liu Z†, Lin R†, Li E, Mao Z, Ling J, Yang Y, Yin WB*, Xie B*. Biosynthesis of antibiotic leucinostatins in bio-control fungus Purpureocillium lilacinum and their inhibition on Phytophthora revealed by genome mining. PLOS Pathogens. 2016,12(7):e1005685. 16. Lin R†, Liu C†, Shen B, Bai M, Ling J, Chen G, Mao Z, Cheng X*, Xie B*. Analysis of the complete mitochondrial genome of Pochonia chlamydosporia suggests a close relationship to the invertebrate-pathogenic fungi in Hypocreales. BMC Microbiology. 2015,15:5. 17. Lei D†, Lin R†, Yin C†, Li P*, Zheng A*. Global protein-protein interaction network of rice sheath blight pathogen. Journal of Proteome Research. 2014,13(7):3277-3293. 18. Zheng A†*, Lin R†, Zhang D, Qin P, Xu L, Ai P, Ding L, Wang Y, Chen Y, Liu Y, Sun Z, Feng H, Liang X, Fu R, Tang C, Li Q, Zhang J, Xie Z, Deng Q, Li S, Wang S, Zhu J, Wang L, Liu H, Li P*. The evolution and pathogenic mechanisms of the rice sheath blight pathogen. Nature Communications. 2013,4:1424. 三、专著: 1. Lin R, Cheng X*, Xie B*. Comparative analysis of Pochonia chlamydosporia mitogenome reveals dynamic mitochondrial evolution of the nematophagous fungi in Hypocreales. In: Perspectives in sustainable nematode management through Pochonia chlamydosporia applications for root and rhizosphere health. (eds Manzanilla-López RH, Lopez-Llorca LV). Springer. 2017, pp:183–195, Chapter 9. 四、授权专利: 1. 王晓武; 林润茂; 武剑; 梁建丽; 郭新磊. 基于单细胞转录组测序数据的细胞聚类方法, 2022-02-08, 中国, ZL 2021 1 0983443.7. 五、软件著作权: 1. 林润茂; 刘铜; 王晓婷; 杨繁兴; 王芷茵. 真菌线粒体基因组分析软件, 2023-09-26,2023SR1163714. 2. 林润茂; 王晓武; 武剑; 梁建丽; 郭新磊. CADEG:全基因组差异表达基因的比较分析软件, 2020-03-19, 2020SR0277868. |